# Copyright 1999-2020 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2

EAPI=7

inherit R-packages

DESCRIPTION='The removal of batch effects fro... (see metadata)'
KEYWORDS="~amd64"
SRC_URI="http://master.bioconductor.org/packages/3.9/bioc/src/contrib/Harman_1.12.0.tar.gz"
LICENSE='GPL-3'

IUSE="${IUSE-} r_suggests_biocgenerics r_suggests_biocstyle r_suggests_knitr
	r_suggests_limma r_suggests_rcolorbrewer r_suggests_rmarkdown
	r_suggests_runit r_suggests_sva"
R_SUGGESTS="
	r_suggests_biocgenerics? ( sci-BIOC/BiocGenerics )
	r_suggests_biocstyle? ( sci-BIOC/BiocStyle )
	r_suggests_knitr? ( sci-CRAN/knitr )
	r_suggests_limma? ( sci-BIOC/limma )
	r_suggests_rcolorbrewer? ( sci-CRAN/RColorBrewer )
	r_suggests_rmarkdown? ( sci-CRAN/rmarkdown )
	r_suggests_runit? ( sci-CRAN/RUnit )
	r_suggests_sva? ( sci-BIOC/sva )
"
DEPEND=">=dev-lang/R-3.5
	>=sci-CRAN/Rcpp-0.11.2
"
RDEPEND="${DEPEND-}
	sci-CRAN/Rcpp
	${R_SUGGESTS-}
"

_UNRESOLVED_PACKAGES=(
	'affydata'
	'bladderbatch'
	'HarmanData'
	'minfiData'
	'sci-BIOC/lumi'
	'sci-BIOC/minfi'
	'sci-BIOC/msmsEDA'
)