# Copyright 1999-2020 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2

EAPI=7

inherit R-packages

DESCRIPTION='Wrench normalization for sparse count data'
KEYWORDS="~amd64"
SRC_URI="http://master.bioconductor.org/packages/3.9/bioc/src/contrib/Wrench_1.2.0.tar.gz"
LICENSE='Artistic-2'

IUSE="${IUSE-} r_suggests_edger r_suggests_knitr r_suggests_metagenomeseq
	r_suggests_rmarkdown"
R_SUGGESTS="
	r_suggests_edger? ( sci-BIOC/edgeR )
	r_suggests_knitr? ( sci-CRAN/knitr )
	r_suggests_metagenomeseq? ( sci-BIOC/metagenomeSeq )
	r_suggests_rmarkdown? ( sci-CRAN/rmarkdown )
"
DEPEND=">=dev-lang/R-3.5.0
	sci-BIOC/limma
	virtual/Matrix
	sci-CRAN/locfit
"
RDEPEND="${DEPEND-} ${R_SUGGESTS-}"

_UNRESOLVED_PACKAGES=( 'sci-BIOC/DESeq2' )